miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Drosophila melanogaster, Drosophila simulans, Drosophila sechellia, Drosophila erecta, Drosophila yakuba



ABOUT THIS RECORD

ID: MNEST009541
species: Drosophila erecta
miRNA family: miR-3227
source: miRNEST

Taxonomy by NCBI:
Drosophila erecta melanogaster subgroup melanogaster group Sophophora Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAGCAAGTTTTTAGGACGCTG

miRNA*
GCCTAAAACTGTGCTGAC

mismatches: 5
bulges: 1

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pre-miRNA
AAAGACCACCCTAGCAAGTTTTTAGGACGCTGAGCAGTTACCGCTTCGCCTAAAACTGTGCTGACCGGACTCC

dot-bracket secondary structure
........((.(((((...(((((((.((..((((.......)))))))))))))...)))))...)).....


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





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